This article provides a reason why the total valuation balance on the Inventory | Enquiry | Valuation by Date, may not be corresponding with the General Ledger Inventory Control account.
There may be a host of reasons that could cause the above mentioned imbalance such as direct journals on the Inventory Control account, ignoring multiple Inv. Control accounts, allowing negative quantities etc.
However, please consider the following specific reason that may play a role here:
It may be that the Reset cumulative value when quantity is zero option has been selected as can be seen below

To explain this a bit further, consider the following scenario:
1. Create a new stock item: VALUATION
2. Process a GRV at a cost of R10 (excl.) for 1 unit on 2015/06/22
3. Process a GRV at a cost of R20 (excl.) for 1 unit on 2015/06/18
4. Process an Invoice for 1 unit on 2015/06/19
5. View the Inventory Enquiry | Valuation by date with the setting as below.

6. From the above, notice the following:
6.1 As no resetting of valuation calculation is supposed to take place here, the total valuation calculated is as follow:
GRV 1 valuation (R20 x 1) + GRV 2 valuation (R10 x 1) / total number of units on the
GRV’s
= 30/2
= R15.00
6.2 The R15.00 valuation above is therefore correct and fully corresponds with the Inventory Maintenance | Ave Cost value,

as well as the portion that is contributed on the GL Inventory Control account, so no problem here.
7. However, now select the Reset option below and run the report as below

8. From the above, notice the following:
9. The above discussed scenario focus on a specific item but at least you now understand why the Valuation by Date Enquiry will differ with the Inventory Control Account when not filtering on any stock items.
Therefore, as a rule of thumb, when analysing the current, actual inventory valuation balance and making use of the Valuation by Date Enquiry screen, always ensure to unselect the above reset option.
However, also note the main reason for having the reset option in the first place:
It’s especially helpful when analysing: